species:   Drmel
pid:       MI0000126
parent:    dme-mir-6-3
paralog:   
locus:     NT_033778.4:19660716-19660795
matures:   ['UAUCACAGUGGCUGUUCUUUUU', 'AGGGAACGGUUGCUGAUGAUGUA']
srr:       SRR11906543
genome:    /Users/jax/+Genomes/Animal_genomes/Drmel.GCF_000001215.4_Release_6_plus_ISO1_MT_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906543.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906543.cram NT_033778.4:19660716-19660795

0 out of bounds
6 alignments
6 proper strand
5 stranded perfect matches

       ************************                   ***********************       
CAAAAAGAAGGGAACGGUUGCUGAUGAUGUAGUUUGAAACUCUCACAAUUUAUAUCACAGUGGCUGUUCUUUUUUGUUUG
((((.((((((((((((((((((.((((((((.(((.........))).)))))))))))))))))))))))))).))))
----------------------------------------------------UAUCACAGUGGCUGUUCUUUUU------ l=22 a=2 c
--------AGGGAACGGUUGCUGAUGAUGUA------------------------------------------------- l=23 a=0 c*
----------------------------------------------------UAUCACAGUGGCUGUUCUUUU------- l=21 a=3 ma
---------GGGAACGGUUGCUGAUGAUGUA------------------------------------------------- l=22 a=0 ma*

----------------------------------------------------UAUCACAGUGGCUGUUCUUUU------- l=21 a=3 (ma)
----------------------------------------------------UAUCACAcUGGCUGUUCUUUU------- l=21 a=1 
----------------------------------------------------UAUCACAGUGGCUGUUCUUUUU------ l=22 a=2 (c)

mb-01011
ax-1011111
ku-01
ss-111111111110
fn-111
